Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 HAUS4P1-201ENST00000406739 1145 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 KRT18P2-201ENST00000447938 1258 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AC018845.2-201ENST00000568326 409 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AC002347.1-201ENST00000569543 541 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 MIR3909-201ENST00000579518 119 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AL671883.3-201ENST00000603274 991 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AC004877.2-201ENST00000623941 599 ntBASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LIN7CQ9NUP9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 PDPK2P-202ENST00000562415 1191 ntBASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIN7CQ9NUP9 AC008677.1-201ENST00000519230 1561 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms