Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 ME2P1-201ENST00000426028 1970 ntBASIC19.08■□□□□ 0.65
RTN4Q9NQC3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTN4Q9NQC3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 MYCLP1-201ENST00000372451 1075 ntBASIC19.08■□□□□ 0.64
RTN4Q9NQC3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AC113347.1-201ENST00000413321 391 ntBASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AC007967.3-201ENST00000434308 558 ntBASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTN4Q9NQC3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.07■□□□□ 0.64
RTN4Q9NQC3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 AL359075.1-203ENST00000462729 1002 ntBASIC19.07■□□□□ 0.64
RTN4Q9NQC3 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 AC109462.3-201ENST00000573934 613 ntBASIC19.07■□□□□ 0.64
RTN4Q9NQC3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 Z83836.1-201ENST00000624605 1642 ntBASIC19.07■□□□□ 0.64
RTN4Q9NQC3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTN4Q9NQC3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 TSPY5P-201ENST00000426936 936 ntBASIC19.06■□□□□ 0.64
RTN4Q9NQC3 AL392088.1-201ENST00000428364 670 ntBASIC19.06■□□□□ 0.64
RTN4Q9NQC3 AL137013.1-201ENST00000432946 1228 ntBASIC19.06■□□□□ 0.64
RTN4Q9NQC3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 AC093827.2-201ENST00000512654 315 ntBASIC19.06■□□□□ 0.64
RTN4Q9NQC3 HMGB1P8-201ENST00000558211 949 ntBASIC19.06■□□□□ 0.64
RTN4Q9NQC3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms