Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH20Q9HBT6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AL596087.1-201ENST00000400979 1969 ntBASIC14.06□□□□□ -0.16
CDH20Q9HBT6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CNN2P2-201ENST00000443536 909 ntBASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CNN2P3-201ENST00000450201 906 ntBASIC14.06□□□□□ -0.16
CDH20Q9HBT6 HLA-J-203ENST00000494367 1087 ntBASIC14.06□□□□□ -0.16
CDH20Q9HBT6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 AL136317.3-201ENST00000618497 906 ntBASIC14.06□□□□□ -0.16
CDH20Q9HBT6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH20Q9HBT6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC008741.2-201ENST00000612792 3115 ntBASIC14.05□□□□□ -0.16
CDH20Q9HBT6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 HAUS4P1-201ENST00000406739 1145 ntBASIC14.05□□□□□ -0.16
CDH20Q9HBT6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC109322.1-201ENST00000524499 1264 ntBASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AC061975.2-201ENST00000581722 295 ntBASIC14.05□□□□□ -0.16
CDH20Q9HBT6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH20Q9HBT6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms