Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AC013268.4-201ENST00000637413 2228 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 LINC00304-203ENST00000565008 1864 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 AC007541.1-201ENST00000570282 1469 ntBASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCAF1Q9H7N4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC098614.1-201ENST00000368528 745 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 LINC00982-205ENST00000420957 435 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 COX5BP2-201ENST00000392354 334 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AL512384.1-201ENST00000406683 331 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 MTND2P15-201ENST00000418575 892 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC140658.5-201ENST00000438532 169 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC022210.1-201ENST00000449856 793 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AC140912.1-201ENST00000577171 1054 ntBASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC24.1■■□□□ 1.45
SCAF1Q9H7N4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AL359258.3-201ENST00000622910 2331 ntBASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 MTND1P26-201ENST00000440488 538 ntBASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 RN7SL752P-201ENST00000463779 287 ntBASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AC106795.5-201ENST00000623288 454 ntBASIC24.09■■□□□ 1.45
SCAF1Q9H7N4 AL590560.3-201ENST00000623350 461 ntBASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms