Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RTFDC1Q9BY42 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AC107373.2-201ENST00000607735 490 ntBASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTFDC1Q9BY42 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.19■□□□□ 0.66
RTFDC1Q9BY42 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTFDC1Q9BY42 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms