Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 TSPY16P-201ENST00000449843 468 ntBASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 AC245100.5-201ENST00000452108 331 ntBASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 AC004890.2-204ENST00000481968 304 ntBASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 REXO1L8P-201ENST00000604378 1897 ntBASIC13.4□□□□□ -0.26
SSBP3Q9BWW4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.4□□□□□ -0.27
SSBP3Q9BWW4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SSBP3Q9BWW4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AC087499.5-201ENST00000452760 1342 ntBASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AL080243.2-201ENST00000418783 582 ntBASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 RN7SL618P-201ENST00000477850 296 ntBASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AC022144.1-201ENST00000602255 1580 ntBASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms