Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AC073621.1-201ENST00000392730 636 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 FIS1-203ENST00000442303 631 ntTSL 3 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MTRF1LP2-201ENST00000506027 1122 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TCAP-202ENST00000578283 583 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 WT1-AS_2.1-201ENST00000613208 137 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 REXO1L3P-201ENST00000622202 1288 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AL645728.2-201ENST00000641974 660 ntBASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LIMD2Q9BT23 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 EMBP1-201ENST00000458200 901 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC108073.2-201ENST00000464002 357 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC092910.1-201ENST00000482027 1129 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC108751.1-201ENST00000490852 363 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 SLC25A6P2-201ENST00000497974 877 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AP001005.1-201ENST00000571755 1248 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 RN7SL510P-201ENST00000581311 263 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CALM3-211ENST00000598871 561 ntTSL 4 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TP73-AS1-207ENST00000624167 988 ntBASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms