Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
VGLL1Q99990 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.21□□□□□ -0.45
VGLL1Q99990 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
VGLL1Q99990 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 HAUS4P1-201ENST00000406739 1145 ntBASIC12.21□□□□□ -0.45
VGLL1Q99990 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 FAM197Y8-203ENST00000450145 560 ntBASIC12.21□□□□□ -0.45
VGLL1Q99990 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.21□□□□□ -0.45
VGLL1Q99990 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.21□□□□□ -0.45
VGLL1Q99990 TP73-AS1-207ENST00000624167 988 ntBASIC12.21□□□□□ -0.45
VGLL1Q99990 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
VGLL1Q99990 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
VGLL1Q99990 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.21□□□□□ -0.46
VGLL1Q99990 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VGLL1Q99990 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VGLL1Q99990 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.21□□□□□ -0.46
VGLL1Q99990 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.21□□□□□ -0.46
VGLL1Q99990 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VGLL1Q99990 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VGLL1Q99990 AC020658.6-201ENST00000623564 1870 ntBASIC12.21□□□□□ -0.46
VGLL1Q99990 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 AC093724.1-201ENST00000448659 1027 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.2□□□□□ -0.46
VGLL1Q99990 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 KRT18P56-201ENST00000507275 550 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 UNC93B7-201ENST00000509439 705 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 AL031432.2-201ENST00000566714 459 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 AL928711.1-201ENST00000570165 459 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 MIR3909-201ENST00000579518 119 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.2□□□□□ -0.46
VGLL1Q99990 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 AC023157.3-201ENST00000619086 2088 ntBASIC12.2□□□□□ -0.46
VGLL1Q99990 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VGLL1Q99990 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
VGLL1Q99990 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.2□□□□□ -0.46
VGLL1Q99990 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms