Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 C1QBPP1-201ENST00000400117 770 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AL590640.2-201ENST00000457038 527 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AC126915.1-201ENST00000522847 1038 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AC005915.1-201ENST00000624912 2018 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AL021920.2-201ENST00000624828 1351 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 RPSAP31-201ENST00000416648 895 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 LINC01451-201ENST00000623792 534 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 COX6A1P2-201ENST00000620597 330 ntBASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 AL139010.1-201ENST00000454878 894 ntBASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 AL138688.1-201ENST00000624851 1594 ntBASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD1Q96PZ7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.4□□□□□ -0.27
CSMD1Q96PZ7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MIR769-201ENST00000390225 118 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ACTG1P2-201ENST00000415776 1125 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ACTG1P11-201ENST00000425411 1125 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms