Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AC000095.1-201ENST00000603208 874 ntBASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AC069224.1-201ENST00000566372 1715 ntBASIC18.54■□□□□ 0.56
CCDC17Q96LX7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 KRT18P43-201ENST00000469825 1281 ntBASIC18.53■□□□□ 0.56
CCDC17Q96LX7 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.53■□□□□ 0.56
CCDC17Q96LX7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC17Q96LX7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 KRT8P22-201ENST00000562317 1415 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 ARSEP1-201ENST00000420443 635 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AL162726.2-201ENST00000438986 1017 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AC015936.2-201ENST00000593177 259 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AL359881.2-201ENST00000602973 570 ntBASIC18.52■□□□□ 0.56
CCDC17Q96LX7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC17Q96LX7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC17Q96LX7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.52■□□□□ 0.55
CCDC17Q96LX7 LTB4R2-202ENST00000528054 3092 ntBASIC18.52■□□□□ 0.55
CCDC17Q96LX7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC17Q96LX7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.52■□□□□ 0.55
CCDC17Q96LX7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CCDC17Q96LX7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CCDC17Q96LX7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC17Q96LX7 AC124067.4-201ENST00000519691 2379 ntBASIC18.51■□□□□ 0.55
CCDC17Q96LX7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms