Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL118508.1-201ENST00000613502 2345 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 CYP2T1P-202ENST00000641596 2535 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.21■□□□□ 0.35
SNX27Q96L92 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.21■□□□□ 0.35
SNX27Q96L92 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.21■□□□□ 0.35
SNX27Q96L92 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.21■□□□□ 0.35
SNX27Q96L92 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 AC136604.1-201ENST00000418535 575 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 AC055876.2-201ENST00000531834 546 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SNX27Q96L92 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 GPR182-203ENST00000622922 591 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.21■□□□□ 0.35
SNX27Q96L92 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
SNX27Q96L92 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SNX27Q96L92 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.21■□□□□ 0.34
SNX27Q96L92 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.2■□□□□ 0.34
SNX27Q96L92 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 OR6D1P-203ENST00000641209 4860 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 SLC7A15P-201ENST00000424028 1363 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 AL391825.1-201ENST00000457671 1364 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SNX27Q96L92 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SNX27Q96L92 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.2■□□□□ 0.34
SNX27Q96L92 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.2■□□□□ 0.34
SNX27Q96L92 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 AC092552.1-201ENST00000547243 906 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 TP53TG3HP-202ENST00000569755 579 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.2■□□□□ 0.34
SNX27Q96L92 AC140912.1-201ENST00000577171 1054 ntBASIC17.2■□□□□ 0.34
SNX27Q96L92 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.2■□□□□ 0.34
SNX27Q96L92 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
SNX27Q96L92 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SNX27Q96L92 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SNX27Q96L92 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SNX27Q96L92 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNX27Q96L92 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 AC018892.3-201ENST00000623986 2499 ntBASIC17.19■□□□□ 0.34
SNX27Q96L92 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SNX27Q96L92 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNX27Q96L92 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.19■□□□□ 0.34
SNX27Q96L92 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.19■□□□□ 0.34
SNX27Q96L92 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms