Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 EMBP1-201ENST00000458200 901 ntBASIC15.45■□□□□ 0.06
VPS33AQ96AX1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AL365209.1-201ENST00000624418 6473 ntBASIC15.45■□□□□ 0.06
VPS33AQ96AX1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS33AQ96AX1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 OR2I1P-209ENST00000641730 5365 ntBASIC15.44■□□□□ 0.06
VPS33AQ96AX1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 AC011477.6-201ENST00000604980 1927 ntBASIC15.44■□□□□ 0.06
VPS33AQ96AX1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VPS33AQ96AX1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS33AQ96AX1 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms