Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 AC006449.5-201ENST00000610658 2098 ntBASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ATP6V0A1Q93050 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 MYCLP2-201ENST00000449268 967 ntBASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC025048.3-201ENST00000590609 569 ntBASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC074044.1-201ENST00000609673 707 ntBASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC005702.4-201ENST00000618393 416 ntBASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATP6V0A1Q93050 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 IGHV3-71-201ENST00000523324 359 ntBASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 MIR6752-201ENST00000618442 71 ntBASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 AC084018.2-201ENST00000613093 2607 ntBASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0A1Q93050 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP6V0A1Q93050 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms