Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTN4IP1Q8WWV3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC096734.2-201ENST00000562054 433 ntBASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC120114.3-201ENST00000611923 658 ntBASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC010507.1-201ENST00000633895 436 ntBASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AL645728.2-201ENST00000641974 660 ntBASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF259P1-201ENST00000407656 1365 ntBASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.55□□□□□ -0.24
RTN4IP1Q8WWV3 AC097376.2-205ENST00000610159 5334 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AL031432.2-201ENST00000566714 459 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AL928711.1-201ENST00000570165 459 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 U82695.1-201ENST00000635752 1889 ntBASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.54□□□□□ -0.24
RTN4IP1Q8WWV3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms