Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 AC092364.2-201ENST00000596710 2692 ntBASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 AL596257.1-201ENST00000641463 2694 ntBASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 RPL37AP1-201ENST00000412502 279 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AL079307.3-201ENST00000556114 283 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AJ011932.1-201ENST00000621707 465 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AL590560.3-201ENST00000623350 461 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FNDC9Q8TBE3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 AC067930.6-201ENST00000623257 4947 ntBASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 AL139010.1-201ENST00000454878 894 ntBASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 TEX28P1-201ENST00000613479 1221 ntBASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 TEX28P2-201ENST00000617764 1221 ntBASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FNDC9Q8TBE3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms