Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 AC026979.3-201ENST00000607315 403 ntBASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH19Q8TAB3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 AC105021.1-202ENST00000570572 669 ntBASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 AC092127.1-201ENST00000567093 3455 ntBASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH19Q8TAB3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC020658.6-201ENST00000623564 1870 ntBASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 HYMAI-201ENST00000635591 3347 ntBASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AL353705.2-201ENST00000428243 662 ntBASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDH19Q8TAB3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDH19Q8TAB3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms