Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM53Q6P2H8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SLC25A6P2-201ENST00000497974 877 ntBASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM53Q6P2H8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AC073869.1-201ENST00000415574 2762 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 IL9RP2-201ENST00000423948 1312 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AC009947.1-201ENST00000444350 727 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 DUX4L17-201ENST00000557360 1267 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 Z83851.2-201ENST00000609564 659 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 AC120114.3-201ENST00000611923 658 ntBASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM53Q6P2H8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms