Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AL118508.1-201ENST00000613502 2345 ntBASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SWSAP1Q6NVH7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC063926.2-201ENST00000623766 1308 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC099398.1-201ENST00000567919 2776 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 NME2P1-201ENST00000426182 414 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 KRT18P64-201ENST00000434946 1219 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 HNRNPUP1-201ENST00000554987 333 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC007431.3-201ENST00000623221 587 ntBASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SWSAP1Q6NVH7 AC011477.6-201ENST00000604980 1927 ntBASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms