Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 AC074386.1-202ENST00000463561 864 ntBASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 AC018845.2-201ENST00000568326 409 ntBASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.98□□□□□ -0.17
ATPAF1Q5TC12 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AC069224.1-201ENST00000566372 1715 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AL512652.2-201ENST00000625156 1716 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AC016027.1-202ENST00000607927 1699 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 AL031731.1-201ENST00000642131 2094 ntBASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATPAF1Q5TC12 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.96□□□□□ -0.17
ATPAF1Q5TC12 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms