Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
USH1GQ495M9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.33■□□□□ 0.53
USH1GQ495M9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.33■□□□□ 0.53
USH1GQ495M9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USH1GQ495M9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USH1GQ495M9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.33■□□□□ 0.52
USH1GQ495M9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.33■□□□□ 0.52
USH1GQ495M9 DGCR5-201ENST00000399539 862 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 TARDBPP1-201ENST00000442013 1203 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.33■□□□□ 0.52
USH1GQ495M9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USH1GQ495M9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.33■□□□□ 0.52
USH1GQ495M9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.33■□□□□ 0.52
USH1GQ495M9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USH1GQ495M9 AC055876.2-201ENST00000531834 546 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.33■□□□□ 0.52
USH1GQ495M9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.33■□□□□ 0.52
USH1GQ495M9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.33■□□□□ 0.52
USH1GQ495M9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 AC006449.5-201ENST00000610658 2098 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 Z97205.2-201ENST00000564697 1639 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 AC099398.1-201ENST00000567919 2776 ntBASIC18.33■□□□□ 0.52
USH1GQ495M9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USH1GQ495M9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.33■□□□□ 0.52
USH1GQ495M9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USH1GQ495M9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USH1GQ495M9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USH1GQ495M9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 AC087499.6-201ENST00000411576 835 ntBASIC18.32■□□□□ 0.52
USH1GQ495M9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.32■□□□□ 0.52
USH1GQ495M9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.32■□□□□ 0.52
USH1GQ495M9 AC092337.1-201ENST00000568699 1129 ntBASIC18.32■□□□□ 0.52
USH1GQ495M9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.32■□□□□ 0.52
USH1GQ495M9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.32■□□□□ 0.52
USH1GQ495M9 AL358472.5-202ENST00000641448 1267 ntBASIC18.32■□□□□ 0.52
USH1GQ495M9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.32■□□□□ 0.52
USH1GQ495M9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USH1GQ495M9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 AL391825.1-201ENST00000457671 1364 ntBASIC18.31■□□□□ 0.52
USH1GQ495M9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USH1GQ495M9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 MIR648-201ENST00000385046 94 ntBASIC18.31■□□□□ 0.52
USH1GQ495M9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC074338.1-201ENST00000416825 156 ntBASIC18.31■□□□□ 0.52
USH1GQ495M9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.31■□□□□ 0.52
USH1GQ495M9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms