Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX7Q2KHR2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
RFX7Q2KHR2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 INE1-201ENST00000456273 945 ntBASIC19.2■□□□□ 0.66
RFX7Q2KHR2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 MIR6069-201ENST00000620069 79 ntBASIC19.2■□□□□ 0.66
RFX7Q2KHR2 AC018892.3-201ENST00000623986 2499 ntBASIC19.2■□□□□ 0.66
RFX7Q2KHR2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 Z97205.2-201ENST00000564697 1639 ntBASIC19.2■□□□□ 0.66
RFX7Q2KHR2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX7Q2KHR2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC087499.6-201ENST00000411576 835 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC098850.1-201ENST00000419919 790 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC007274.1-201ENST00000439805 662 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 KRT17P7-201ENST00000451704 1104 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AP006294.1-201ENST00000415407 339 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ARSEP1-201ENST00000420443 635 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ELK1P1-201ENST00000485699 580 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 GIMAP3P-201ENST00000495150 836 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 TPRX2P-201ENST00000535362 881 ntBASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.19■□□□□ 0.66
RFX7Q2KHR2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX7Q2KHR2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms