Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PUDPQ08623 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 AC023274.1-201ENST00000418278 595 ntBASIC14.69□□□□□ -0.06
PUDPQ08623 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.69□□□□□ -0.06
PUDPQ08623 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.69□□□□□ -0.06
PUDPQ08623 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.69□□□□□ -0.06
PUDPQ08623 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 AC073439.1-201ENST00000624121 1774 ntBASIC14.69□□□□□ -0.06
PUDPQ08623 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PUDPQ08623 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PUDPQ08623 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PUDPQ08623 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PUDPQ08623 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PUDPQ08623 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.68□□□□□ -0.06
PUDPQ08623 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.68□□□□□ -0.06
PUDPQ08623 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 RARRES2P8-201ENST00000566335 367 ntBASIC14.68□□□□□ -0.06
PUDPQ08623 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 AC002347.1-201ENST00000569543 541 ntBASIC14.68□□□□□ -0.06
PUDPQ08623 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 AC099522.2-201ENST00000607001 744 ntBASIC14.68□□□□□ -0.06
PUDPQ08623 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PUDPQ08623 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PUDPQ08623 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.68□□□□□ -0.06
PUDPQ08623 AC097376.2-205ENST00000610159 5334 ntBASIC14.68□□□□□ -0.06
PUDPQ08623 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.68□□□□□ -0.06
PUDPQ08623 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PUDPQ08623 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PUDPQ08623 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.67□□□□□ -0.06
PUDPQ08623 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.67□□□□□ -0.06
PUDPQ08623 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PUDPQ08623 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PUDPQ08623 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.67□□□□□ -0.06
PUDPQ08623 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PUDPQ08623 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.67□□□□□ -0.06
PUDPQ08623 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PUDPQ08623 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms