Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PER3P56645 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 LINC02012-201ENST00000608206 1725 ntBASIC14.9□□□□□ -0.02
PER3P56645 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PER3P56645 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 AC098614.1-201ENST00000368528 745 ntBASIC14.9□□□□□ -0.02
PER3P56645 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 SLC25A1P3-201ENST00000395415 828 ntBASIC14.9□□□□□ -0.02
PER3P56645 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.9□□□□□ -0.02
PER3P56645 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.9□□□□□ -0.02
PER3P56645 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.9□□□□□ -0.02
PER3P56645 IGHV3-71-201ENST00000523324 359 ntBASIC14.9□□□□□ -0.02
PER3P56645 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.9□□□□□ -0.02
PER3P56645 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PER3P56645 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.9□□□□□ -0.02
PER3P56645 AC003101.2-201ENST00000612557 442 ntBASIC14.9□□□□□ -0.02
PER3P56645 AC018529.1-201ENST00000613063 361 ntBASIC14.9□□□□□ -0.02
PER3P56645 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 TUBB8P12-201ENST00000308911 1335 ntBASIC14.9□□□□□ -0.02
PER3P56645 TUBB7P-202ENST00000428444 1305 ntBASIC14.9□□□□□ -0.02
PER3P56645 TUBB8P7-204ENST00000567960 1332 ntBASIC14.9□□□□□ -0.02
PER3P56645 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PER3P56645 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PER3P56645 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.89□□□□□ -0.03
PER3P56645 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PER3P56645 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.89□□□□□ -0.03
PER3P56645 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 AC005915.1-201ENST00000624912 2018 ntBASIC14.89□□□□□ -0.03
PER3P56645 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PER3P56645 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.89□□□□□ -0.03
PER3P56645 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PER3P56645 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 ARSEP1-201ENST00000420443 635 ntBASIC14.89□□□□□ -0.03
PER3P56645 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PER3P56645 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.89□□□□□ -0.03
PER3P56645 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.89□□□□□ -0.03
PER3P56645 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.89□□□□□ -0.03
PER3P56645 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PER3P56645 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms