Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.29■□□□□ 0.04
NR1H2P55055 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.29■□□□□ 0.04
NR1H2P55055 AD001527.2-201ENST00000622994 785 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 AC073592.4-201ENST00000623827 446 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 PGM5P2-202ENST00000637225 1043 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NR1H2P55055 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H2P55055 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.29■□□□□ 0.04
NR1H2P55055 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
NR1H2P55055 AL390755.1-201ENST00000623716 2027 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NR1H2P55055 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.29■□□□□ 0.04
NR1H2P55055 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H2P55055 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 AC010460.3-201ENST00000511359 1579 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR1H2P55055 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NR1H2P55055 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
NR1H2P55055 PCDHA3-202ENST00000532566 4594 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 SIGLEC16-201ENST00000599858 1437 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NR1H2P55055 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR1H2P55055 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 LINC00552-201ENST00000625151 2579 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.28■□□□□ 0.04
NR1H2P55055 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.28■□□□□ 0.04
NR1H2P55055 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.28■□□□□ 0.04
NR1H2P55055 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 AC098831.1-202ENST00000438821 336 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 PRYP5-201ENST00000451909 266 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.28■□□□□ 0.04
NR1H2P55055 Z83851.2-201ENST00000609564 659 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 FAM197Y3-203ENST00000618346 717 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.28■□□□□ 0.04
NR1H2P55055 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR1H2P55055 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NR1H2P55055 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H2P55055 SBF1P1-201ENST00000444527 5631 ntBASIC15.28■□□□□ 0.04
NR1H2P55055 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.04
NR1H2P55055 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.27■□□□□ 0.04
NR1H2P55055 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NR1H2P55055 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 OR2I1P-209ENST00000641730 5365 ntBASIC15.27■□□□□ 0.04
NR1H2P55055 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.27■□□□□ 0.04
NR1H2P55055 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms