Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC25A1P53007 FAM220BP-201ENST00000377689 816 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC25A1P53007 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SLC25A1P53007 TFAMP1-201ENST00000412727 736 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 AL591424.1-201ENST00000442569 1213 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC25A1P53007 FAM86C2P-203ENST00000528684 1004 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC25A1P53007 AC092865.6-201ENST00000642101 219 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC25A1P53007 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC25A1P53007 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 AC068418.2-201ENST00000577309 3703 ntBASIC14.24□□□□□ -0.13
SLC25A1P53007 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC25A1P53007 AC112693.3-201ENST00000624819 1983 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC25A1P53007 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 AL355306.1-201ENST00000415580 579 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 AL671277.1-201ENST00000429656 993 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC25A1P53007 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 AL135744.1-201ENST00000565098 629 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC25A1P53007 AL121894.2-201ENST00000602977 491 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 TNRC18P2-201ENST00000417666 2714 ntBASIC14.23□□□□□ -0.13
SLC25A1P53007 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC25A1P53007 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC25A1P53007 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC25A1P53007 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC25A1P53007 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 NFIC-211ENST00000641145 8399 ntBASIC14.22□□□□□ -0.13
SLC25A1P53007 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC25A1P53007 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SLC25A1P53007 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC25A1P53007 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms