Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.03■□□□□ 0.48
USP11P51784 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 FAM207CP-201ENST00000443486 507 ntBASIC18.03■□□□□ 0.48
USP11P51784 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.03■□□□□ 0.48
USP11P51784 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.03■□□□□ 0.48
USP11P51784 AC135586.1-201ENST00000539323 574 ntBASIC18.03■□□□□ 0.48
USP11P51784 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.03■□□□□ 0.48
USP11P51784 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.03■□□□□ 0.48
USP11P51784 AC004461.2-201ENST00000629517 803 ntBASIC18.03■□□□□ 0.48
USP11P51784 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.03■□□□□ 0.48
USP11P51784 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP11P51784 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
USP11P51784 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.02■□□□□ 0.48
USP11P51784 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
USP11P51784 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 AC008741.2-201ENST00000612792 3115 ntBASIC18.02■□□□□ 0.48
USP11P51784 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
USP11P51784 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 AC074338.1-201ENST00000416825 156 ntBASIC18.02■□□□□ 0.48
USP11P51784 FAM8A3P-201ENST00000427218 844 ntBASIC18.02■□□□□ 0.48
USP11P51784 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
USP11P51784 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.02■□□□□ 0.48
USP11P51784 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
USP11P51784 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.02■□□□□ 0.48
USP11P51784 AC092337.1-201ENST00000568699 1129 ntBASIC18.02■□□□□ 0.48
USP11P51784 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP11P51784 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP11P51784 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP11P51784 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP11P51784 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.02■□□□□ 0.47
USP11P51784 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP11P51784 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP11P51784 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.01■□□□□ 0.47
USP11P51784 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 AL607033.1-201ENST00000623900 1599 ntBASIC18.01■□□□□ 0.47
USP11P51784 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
USP11P51784 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.01■□□□□ 0.47
USP11P51784 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.01■□□□□ 0.47
USP11P51784 RPL13P2-201ENST00000440687 659 ntBASIC18.01■□□□□ 0.47
USP11P51784 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.01■□□□□ 0.47
USP11P51784 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.01■□□□□ 0.47
USP11P51784 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.01■□□□□ 0.47
USP11P51784 AC009118.2-201ENST00000613275 655 ntBASIC18.01■□□□□ 0.47
USP11P51784 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.01■□□□□ 0.47
USP11P51784 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP11P51784 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms