Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.72■□□□□ 0.43
CENPFP49454 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.71■□□□□ 0.43
CENPFP49454 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.71■□□□□ 0.43
CENPFP49454 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.71■□□□□ 0.43
CENPFP49454 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.71■□□□□ 0.43
CENPFP49454 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
CENPFP49454 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CENPFP49454 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 CD8B2-202ENST00000417670 633 ntBASIC17.71■□□□□ 0.43
CENPFP49454 CNN2P10-201ENST00000443067 918 ntBASIC17.71■□□□□ 0.43
CENPFP49454 AC022217.1-201ENST00000521069 738 ntBASIC17.71■□□□□ 0.43
CENPFP49454 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.71■□□□□ 0.43
CENPFP49454 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.71■□□□□ 0.43
CENPFP49454 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.71■□□□□ 0.43
CENPFP49454 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CENPFP49454 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.71■□□□□ 0.42
CENPFP49454 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CENPFP49454 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CENPFP49454 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 BNIP3P1-202ENST00000550043 1585 ntBASIC17.7■□□□□ 0.42
CENPFP49454 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 RN7SL181P-201ENST00000462921 277 ntBASIC17.7■□□□□ 0.42
CENPFP49454 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.7■□□□□ 0.42
CENPFP49454 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.7■□□□□ 0.42
CENPFP49454 AL354989.2-201ENST00000435838 1540 ntBASIC17.7■□□□□ 0.42
CENPFP49454 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CENPFP49454 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CENPFP49454 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.7■□□□□ 0.42
CENPFP49454 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.7■□□□□ 0.42
CENPFP49454 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 AC125604.1-201ENST00000496255 707 ntBASIC17.7■□□□□ 0.42
CENPFP49454 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CENPFP49454 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CENPFP49454 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.7■□□□□ 0.42
CENPFP49454 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.7■□□□□ 0.42
CENPFP49454 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CENPFP49454 AC148477.4-201ENST00000613430 1793 ntBASIC17.7■□□□□ 0.42
CENPFP49454 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 AL121723.1-201ENST00000445194 1519 ntBASIC17.69■□□□□ 0.42
CENPFP49454 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.69■□□□□ 0.42
CENPFP49454 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPFP49454 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.69■□□□□ 0.42
CENPFP49454 AC093813.1-201ENST00000605066 256 ntBASIC17.69■□□□□ 0.42
CENPFP49454 AC107373.2-201ENST00000607735 490 ntBASIC17.69■□□□□ 0.42
CENPFP49454 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.69■□□□□ 0.42
CENPFP49454 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CENPFP49454 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPFP49454 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CENPFP49454 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CENPFP49454 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.69■□□□□ 0.42
CENPFP49454 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.69■□□□□ 0.42
CENPFP49454 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.69■□□□□ 0.42
CENPFP49454 AC009486.1-201ENST00000569860 813 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms