Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 BCRP2-202ENST00000447763 634 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.71■□□□□ 0.27
MTHFRP42898 PFN1P12-201ENST00000455938 534 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 BCRP6-201ENST00000510112 632 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 BCRP7-201ENST00000511549 544 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MTHFRP42898 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.71■□□□□ 0.27
MTHFRP42898 BRI3BPP1-201ENST00000594224 787 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFRP42898 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MTHFRP42898 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MTHFRP42898 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFRP42898 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.71■□□□□ 0.27
MTHFRP42898 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.71■□□□□ 0.27
MTHFRP42898 PCGF3-213ENST00000620529 1899 ntBASIC16.71■□□□□ 0.27
MTHFRP42898 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTHFRP42898 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MTHFRP42898 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
MTHFRP42898 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 AC005622.1-201ENST00000636801 1703 ntBASIC16.7■□□□□ 0.26
MTHFRP42898 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 AL355864.2-201ENST00000447420 863 ntBASIC16.7■□□□□ 0.26
MTHFRP42898 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 FAM86LP-201ENST00000478302 853 ntBASIC16.7■□□□□ 0.26
MTHFRP42898 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 AC068587.3-201ENST00000526613 355 ntBASIC16.7■□□□□ 0.26
MTHFRP42898 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.7■□□□□ 0.26
MTHFRP42898 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 AC244093.1-201ENST00000610837 814 ntBASIC16.7■□□□□ 0.26
MTHFRP42898 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.7■□□□□ 0.26
MTHFRP42898 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MTHFRP42898 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MTHFRP42898 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTHFRP42898 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MTHFRP42898 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
MTHFRP42898 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MTHFRP42898 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 AL645728.1-201ENST00000366221 2101 ntBASIC16.69■□□□□ 0.26
MTHFRP42898 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
MTHFRP42898 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MTHFRP42898 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTHFRP42898 AC004987.2-201ENST00000395959 1148 ntBASIC16.69■□□□□ 0.26
MTHFRP42898 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.69■□□□□ 0.26
MTHFRP42898 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.69■□□□□ 0.26
MTHFRP42898 RPL13P2-201ENST00000440687 659 ntBASIC16.69■□□□□ 0.26
MTHFRP42898 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.69■□□□□ 0.26
MTHFRP42898 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.69■□□□□ 0.26
MTHFRP42898 RPL13AP25-201ENST00000484130 612 ntBASIC16.69■□□□□ 0.26
MTHFRP42898 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms