Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFC4P35249 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.91■□□□□ 0.78
RFC4P35249 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
RFC4P35249 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RFC4P35249 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.9■□□□□ 0.78
RFC4P35249 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.9■□□□□ 0.78
RFC4P35249 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.9■□□□□ 0.78
RFC4P35249 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.9■□□□□ 0.78
RFC4P35249 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.9■□□□□ 0.78
RFC4P35249 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.9■□□□□ 0.78
RFC4P35249 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.9■□□□□ 0.78
RFC4P35249 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RFC4P35249 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RFC4P35249 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFC4P35249 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFC4P35249 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFC4P35249 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFC4P35249 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
RFC4P35249 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.89■□□□□ 0.77
RFC4P35249 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.89■□□□□ 0.77
RFC4P35249 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.89■□□□□ 0.77
RFC4P35249 KRT18P25-201ENST00000508931 1278 ntBASIC19.89■□□□□ 0.77
RFC4P35249 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.89■□□□□ 0.77
RFC4P35249 ACTG1P17-201ENST00000558391 1119 ntBASIC19.89■□□□□ 0.77
RFC4P35249 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 AC097359.3-201ENST00000603982 1210 ntBASIC19.89■□□□□ 0.77
RFC4P35249 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 AP005019.2-201ENST00000615104 511 ntBASIC19.89■□□□□ 0.77
RFC4P35249 AC145423.3-201ENST00000615987 467 ntBASIC19.89■□□□□ 0.77
RFC4P35249 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC4P35249 AC078925.2-201ENST00000624013 1973 ntBASIC19.89■□□□□ 0.77
RFC4P35249 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC4P35249 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RFC4P35249 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.88■□□□□ 0.77
RFC4P35249 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.88■□□□□ 0.77
RFC4P35249 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC4P35249 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.88■□□□□ 0.77
RFC4P35249 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC4P35249 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.88■□□□□ 0.77
RFC4P35249 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC4P35249 AC005695.3-201ENST00000614522 232 ntBASIC19.88■□□□□ 0.77
RFC4P35249 AC132938.4-201ENST00000623835 848 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms