Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 LINC02447-202ENST00000501888 2146 ntBASIC17.86■□□□□ 0.45
COL11A1P12107 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.86■□□□□ 0.45
COL11A1P12107 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.86■□□□□ 0.45
COL11A1P12107 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.86■□□□□ 0.45
COL11A1P12107 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 GAPDHP40-201ENST00000505218 1006 ntBASIC17.86■□□□□ 0.45
COL11A1P12107 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.86■□□□□ 0.45
COL11A1P12107 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
COL11A1P12107 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL11A1P12107 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL11A1P12107 AC011477.6-201ENST00000604980 1927 ntBASIC17.86■□□□□ 0.45
COL11A1P12107 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL11A1P12107 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COL11A1P12107 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 KRT8P44-201ENST00000441609 1350 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
COL11A1P12107 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 MTX1P1-201ENST00000440904 838 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 AC007551.1-201ENST00000457394 519 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.85■□□□□ 0.45
COL11A1P12107 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.85■□□□□ 0.45
COL11A1P12107 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 AC078819.1-201ENST00000547454 765 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 AC012085.1-201ENST00000548270 765 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.85■□□□□ 0.45
COL11A1P12107 C2orf69P2-201ENST00000562032 1123 ntBASIC17.85■□□□□ 0.45
COL11A1P12107 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.85■□□□□ 0.45
COL11A1P12107 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.85■□□□□ 0.45
COL11A1P12107 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL11A1P12107 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
COL11A1P12107 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COL11A1P12107 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 AP003171.2-201ENST00000528208 925 ntBASIC17.84■□□□□ 0.45
COL11A1P12107 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 AC145423.3-201ENST00000615987 467 ntBASIC17.84■□□□□ 0.45
COL11A1P12107 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.84■□□□□ 0.45
COL11A1P12107 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COL11A1P12107 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.84■□□□□ 0.45
COL11A1P12107 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.84■□□□□ 0.45
COL11A1P12107 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.84■□□□□ 0.45
COL11A1P12107 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.84■□□□□ 0.45
COL11A1P12107 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.84■□□□□ 0.45
COL11A1P12107 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.84■□□□□ 0.45
COL11A1P12107 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COL11A1P12107 MIR6787-201ENST00000616675 61 ntBASIC17.84■□□□□ 0.45
COL11A1P12107 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL11A1P12107 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.83■□□□□ 0.45
COL11A1P12107 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL11A1P12107 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms