Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.84■□□□□ 0.29
RARAP10276 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.84■□□□□ 0.29
RARAP10276 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RARAP10276 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.84■□□□□ 0.29
RARAP10276 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RARAP10276 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.84■□□□□ 0.29
RARAP10276 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RARAP10276 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
RARAP10276 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
RARAP10276 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RARAP10276 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.83■□□□□ 0.29
RARAP10276 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RARAP10276 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RARAP10276 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 ELL2P1-201ENST00000413990 1906 ntBASIC16.83■□□□□ 0.28
RARAP10276 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.83■□□□□ 0.28
RARAP10276 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.83■□□□□ 0.28
RARAP10276 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.83■□□□□ 0.28
RARAP10276 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RARAP10276 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 AP002414.2-201ENST00000591780 3365 ntBASIC16.83■□□□□ 0.28
RARAP10276 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.83■□□□□ 0.28
RARAP10276 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RARAP10276 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.83■□□□□ 0.28
RARAP10276 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 AC011477.6-201ENST00000604980 1927 ntBASIC16.82■□□□□ 0.28
RARAP10276 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RARAP10276 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 AC005829.1-201ENST00000570002 483 ntBASIC16.82■□□□□ 0.28
RARAP10276 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 AC024267.1-201ENST00000582320 895 ntBASIC16.82■□□□□ 0.28
RARAP10276 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.82■□□□□ 0.28
RARAP10276 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RARAP10276 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RARAP10276 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RARAP10276 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.81■□□□□ 0.28
RARAP10276 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RARAP10276 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RARAP10276 FER1L4-210ENST00000615531 5998 ntBASIC16.81■□□□□ 0.28
RARAP10276 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.81■□□□□ 0.28
RARAP10276 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RARAP10276 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RARAP10276 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms