Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB2O43679 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB2O43679 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB2O43679 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.99■□□□□ 0.15
LDB2O43679 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB2O43679 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB2O43679 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.98■□□□□ 0.15
LDB2O43679 AZGP1P1-201ENST00000411909 902 ntBASIC15.98■□□□□ 0.15
LDB2O43679 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.98■□□□□ 0.15
LDB2O43679 HIST3H2BA-201ENST00000436555 524 ntBASIC15.98■□□□□ 0.15
LDB2O43679 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.98■□□□□ 0.15
LDB2O43679 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.98■□□□□ 0.15
LDB2O43679 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LDB2O43679 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LDB2O43679 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 AL139384.1-201ENST00000612143 3047 ntBASIC15.97■□□□□ 0.15
LDB2O43679 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LDB2O43679 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LDB2O43679 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 MTND6P24-201ENST00000440466 518 ntBASIC15.97■□□□□ 0.15
LDB2O43679 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.97■□□□□ 0.15
LDB2O43679 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 HNRNPUP1-201ENST00000554987 333 ntBASIC15.97■□□□□ 0.15
LDB2O43679 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 AC097359.3-201ENST00000603982 1210 ntBASIC15.97■□□□□ 0.15
LDB2O43679 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 Z92544.3-201ENST00000624747 417 ntBASIC15.97■□□□□ 0.15
LDB2O43679 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB2O43679 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.97■□□□□ 0.15
LDB2O43679 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 KRT8P12-202ENST00000472924 1397 ntBASIC15.97■□□□□ 0.15
LDB2O43679 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LDB2O43679 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LDB2O43679 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB2O43679 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms