Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
E2F3O00716 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
E2F3O00716 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.65■□□□□ 0.1
E2F3O00716 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.65■□□□□ 0.1
E2F3O00716 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 AC136621.1-201ENST00000624017 2304 ntBASIC15.65■□□□□ 0.1
E2F3O00716 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.65■□□□□ 0.1
E2F3O00716 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.65■□□□□ 0.1
E2F3O00716 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.65■□□□□ 0.1
E2F3O00716 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 FAM86C2P-203ENST00000528684 1004 ntBASIC15.65■□□□□ 0.1
E2F3O00716 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
E2F3O00716 SPCS2P1-201ENST00000561636 679 ntBASIC15.65■□□□□ 0.1
E2F3O00716 AC024267.1-201ENST00000582320 895 ntBASIC15.65■□□□□ 0.1
E2F3O00716 AL513210.1-201ENST00000629608 234 ntBASIC15.65■□□□□ 0.1
E2F3O00716 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
E2F3O00716 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.65■□□□□ 0.1
E2F3O00716 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
E2F3O00716 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
E2F3O00716 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.65■□□□□ 0.1
E2F3O00716 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.65■□□□□ 0.1
E2F3O00716 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
E2F3O00716 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
E2F3O00716 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
E2F3O00716 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
E2F3O00716 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
E2F3O00716 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.64■□□□□ 0.1
E2F3O00716 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
E2F3O00716 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 RN7SL589P-201ENST00000481268 310 ntBASIC15.64■□□□□ 0.09
E2F3O00716 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 AC243562.1-201ENST00000560672 389 ntBASIC15.64■□□□□ 0.09
E2F3O00716 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.64■□□□□ 0.09
E2F3O00716 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.64■□□□□ 0.09
E2F3O00716 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.64■□□□□ 0.09
E2F3O00716 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.64■□□□□ 0.09
E2F3O00716 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.64■□□□□ 0.09
E2F3O00716 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.64■□□□□ 0.09
E2F3O00716 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.64■□□□□ 0.09
E2F3O00716 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
E2F3O00716 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms