Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TVP23AA6NH52 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TVP23AA6NH52 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TVP23AA6NH52 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TVP23AA6NH52 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.38□□□□□ -0.11
TVP23AA6NH52 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TVP23AA6NH52 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TPM4P1-201ENST00000436100 807 ntBASIC14.37□□□□□ -0.11
TVP23AA6NH52 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 AL365330.1-201ENST00000607459 531 ntBASIC14.37□□□□□ -0.11
TVP23AA6NH52 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 PMS2P7-201ENST00000506558 1336 ntBASIC14.37□□□□□ -0.11
TVP23AA6NH52 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
TVP23AA6NH52 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TVP23AA6NH52 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 AC136621.1-201ENST00000624017 2304 ntBASIC14.36□□□□□ -0.11
TVP23AA6NH52 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 WASH6P-202ENST00000359512 1437 ntBASIC14.36□□□□□ -0.11
TVP23AA6NH52 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 RPL13AP23-201ENST00000480739 586 ntBASIC14.36□□□□□ -0.11
TVP23AA6NH52 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 PRYP6-201ENST00000514804 343 ntBASIC14.36□□□□□ -0.11
TVP23AA6NH52 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 AC145285.3-201ENST00000564603 959 ntBASIC14.36□□□□□ -0.11
TVP23AA6NH52 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.36□□□□□ -0.11
TVP23AA6NH52 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms