Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
LINC01546A6NGU7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AP005117.1-201ENST00000584346 1413 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AC015802.1-201ENST00000588104 1449 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 RNU1-129P-201ENST00000384064 167 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PMS2P4-201ENST00000412466 1052 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 IGHV3-47-201ENST00000425060 335 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 KRT17P6-201ENST00000453795 1220 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 U1.21-201ENST00000580816 167 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 TCAF1P1-201ENST00000414990 2232 ntBASIC11.29□□□□□ -0.6
LINC01546A6NGU7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
LINC01546A6NGU7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC01546A6NGU7 RPL5P21-201ENST00000404620 815 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms