Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AL121723.1-201ENST00000445194 1519 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 ACTG1P3-201ENST00000431775 1114 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AC124283.3-201ENST00000570869 594 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 AL049840.4-201ENST00000602422 811 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 MIR6805-201ENST00000615055 62 ntBASIC13.96□□□□□ -0.17
MBD3L3A6NE82 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
MBD3L3A6NE82 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.96□□□□□ -0.18
MBD3L3A6NE82 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 PCDHA14-201ENST00000506751 2298 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 AC018892.3-201ENST00000623986 2499 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 BOLA2P3-201ENST00000404566 256 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 SOCS2P1-201ENST00000417727 557 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 AC234783.1-201ENST00000441761 496 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 USP32P1-208ENST00000506594 1164 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.95□□□□□ -0.18
MBD3L3A6NE82 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MBD3L3A6NE82 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms