Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 MIR1202-201ENST00000408529 83 ntBASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC004898.1-201ENST00000451057 766 ntBASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 HOMER2P2-201ENST00000451621 847 ntBASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LOC102724428A0A0B4J2F2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 ME2P1-201ENST00000426028 1970 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 KRT8P35-201ENST00000483942 1338 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 ALOX12P2-203ENST00000570921 1945 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 MTX1P1-201ENST00000440904 838 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 RNA5SP486-201ENST00000515961 83 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC104982.3-201ENST00000581995 514 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 RN7SL190P-201ENST00000582519 257 ntBASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LOC102724428A0A0B4J2F2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LOC102724428A0A0B4J2F2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.08■□□□□ 0.8
LOC102724428A0A0B4J2F2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.08■□□□□ 0.8
LOC102724428A0A0B4J2F2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.08■□□□□ 0.8
LOC102724428A0A0B4J2F2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LOC102724428A0A0B4J2F2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC138028.6-201ENST00000616106 1482 ntBASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 AC091804.1-201ENST00000486888 567 ntBASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
LOC102724428A0A0B4J2F2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms