Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 MIR1908-201ENST00000410394 80 ntBASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 CSF2RBP1-201ENST00000447905 391 ntBASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC009486.1-201ENST00000569860 813 ntBASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC124283.3-201ENST00000570869 594 ntBASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 MIR6869-201ENST00000619434 62 ntBASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC187A0A096LP49 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC245100.3-201ENST00000441281 285 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 SLED1-202ENST00000512051 380 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AP001889.1-201ENST00000525414 633 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC120045.2-201ENST00000567334 178 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 MIR6787-201ENST00000616675 61 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 BNIP3P1-202ENST00000550043 1585 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 KRT8P44-201ENST00000441609 1350 ntBASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC187A0A096LP49 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC187A0A096LP49 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms