Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PMS2P2-201ENST00000425039 1128 ntBASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AC109322.1-201ENST00000524499 1264 ntBASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AL512356.2-201ENST00000546955 174 ntBASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AC093028.1-201ENST00000622998 982 ntBASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 AC024909.3-201ENST00000611513 2257 ntBASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA3PQ9Y6N3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AC068587.6-202ENST00000641839 5619 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 SPDYE14P-201ENST00000442619 822 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CNN2P2-201ENST00000443536 909 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 CNN2P3-201ENST00000450201 906 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AC018529.1-201ENST00000613063 361 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 MIR6080-201ENST00000617359 66 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AL136317.3-201ENST00000618497 906 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA3PQ9Y6N3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AL645939.2-201ENST00000427340 991 ntBASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AL353705.2-201ENST00000428243 662 ntBASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 FAM86GP-201ENST00000448322 971 ntBASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AC069262.1-201ENST00000539058 672 ntBASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AC003101.2-201ENST00000612557 442 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms