Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC234783.1-201ENST00000441761 496 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC022210.1-201ENST00000449856 793 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AL359711.2-201ENST00000563105 872 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AC133539.2-201ENST00000604757 467 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 KRT8P22-201ENST00000562317 1415 ntBASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 AC079328.2-201ENST00000561241 3354 ntBASIC16.61■□□□□ 0.25
YIPF1Q9Y548 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 USP32P1-208ENST00000506594 1164 ntBASIC16.61■□□□□ 0.25
YIPF1Q9Y548 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.61■□□□□ 0.25
YIPF1Q9Y548 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 AC018892.3-201ENST00000623986 2499 ntBASIC16.61■□□□□ 0.25
YIPF1Q9Y548 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.61■□□□□ 0.25
YIPF1Q9Y548 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
YIPF1Q9Y548 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 INTS4P2-202ENST00000614726 2019 ntBASIC16.6■□□□□ 0.25
YIPF1Q9Y548 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 AC124283.3-201ENST00000570869 594 ntBASIC16.6■□□□□ 0.25
YIPF1Q9Y548 MIR5189-201ENST00000577370 114 ntBASIC16.6■□□□□ 0.25
YIPF1Q9Y548 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.6■□□□□ 0.25
YIPF1Q9Y548 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms