Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 CEND1P1-201ENST00000451006 455 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 ALG1L5P-201ENST00000482043 771 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 PRYP6-201ENST00000514804 343 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 KRT8P23-201ENST00000560090 1207 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 AC073389.1-201ENST00000595595 795 ntBASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAPPC4Q9Y296 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC026748.1-201ENST00000624349 3251 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC105233.2-201ENST00000523697 349 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AF228730.5-201ENST00000530288 346 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC243562.1-201ENST00000560672 389 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC005089.1-201ENST00000619486 2241 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 SNX18-202ENST00000343017 3140 ntBASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAPPC4Q9Y296 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AC112504.1-201ENST00000623415 1841 ntBASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAPPC4Q9Y296 AC092865.5-201ENST00000545435 363 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms