Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 KRT8P22-201ENST00000562317 1415 ntBASIC18.3■□□□□ 0.52
FBXO28Q9NVF7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FBXO28Q9NVF7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FBXO28Q9NVF7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.3■□□□□ 0.52
FBXO28Q9NVF7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FBXO28Q9NVF7 PKD1P1-201ENST00000458669 6805 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 HLA-V-201ENST00000429037 534 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 RPS2P32-201ENST00000439199 892 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AC015936.2-201ENST00000593177 259 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AC133539.2-201ENST00000604757 467 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FBXO28Q9NVF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 BTNL10-201ENST00000595971 695 ntBASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 AC018665.1-201ENST00000622927 1362 ntBASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FBXO28Q9NVF7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 AC018695.7-201ENST00000624587 2492 ntBASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FBXO28Q9NVF7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms