Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3Q9BY71 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 AL033527.5-201ENST00000641382 801 ntBASIC16.65■□□□□ 0.26
LRRC3Q9BY71 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3Q9BY71 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 KRT18P64-201ENST00000434946 1219 ntBASIC16.64■□□□□ 0.25
LRRC3Q9BY71 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 AC017083.2-201ENST00000608069 979 ntBASIC16.64■□□□□ 0.25
LRRC3Q9BY71 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3Q9BY71 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 MIR1909-201ENST00000411312 80 ntBASIC16.63■□□□□ 0.25
LRRC3Q9BY71 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 TOMM22P5-201ENST00000416399 439 ntBASIC16.63■□□□□ 0.25
LRRC3Q9BY71 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRC3Q9BY71 AC007389.4-201ENST00000454674 793 ntBASIC16.63■□□□□ 0.25
LRRC3Q9BY71 AC104596.2-201ENST00000512793 793 ntBASIC16.63■□□□□ 0.25
LRRC3Q9BY71 RAB43P1-201ENST00000561790 589 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms