Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CNN2P10-201ENST00000443067 918 ntBASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC005695.3-201ENST00000614522 232 ntBASIC16.23■□□□□ 0.19
NOTCH4Q99466 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 AL138709.1-201ENST00000614840 1693 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 GPAA1P2-201ENST00000417923 928 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 GOLGA2P4-201ENST00000441462 777 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 YBX1P6-201ENST00000442962 1002 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 PFN1P12-201ENST00000455938 534 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 AL118558.3-201ENST00000607414 1079 ntBASIC16.22■□□□□ 0.19
NOTCH4Q99466 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
NOTCH4Q99466 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NOTCH4Q99466 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AC124067.4-201ENST00000519691 2379 ntBASIC16.21■□□□□ 0.19
NOTCH4Q99466 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 ACTBP8-201ENST00000403258 1108 ntBASIC16.21■□□□□ 0.19
NOTCH4Q99466 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 MIR3615-201ENST00000581999 87 ntBASIC16.21■□□□□ 0.19
NOTCH4Q99466 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AC008687.7-202ENST00000637404 953 ntBASIC16.21■□□□□ 0.19
NOTCH4Q99466 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.21■□□□□ 0.19
NOTCH4Q99466 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NOTCH4Q99466 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NOTCH4Q99466 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms