Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 RPL13P2-201ENST00000440687 659 ntBASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 EEF1DP4-201ENST00000446006 880 ntBASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AC245100.5-201ENST00000452108 331 ntBASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC85AQ96PX6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 KRT17P8-201ENST00000540749 863 ntBASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 REXO1L1P-202ENST00000608646 1974 ntBASIC19.81■□□□□ 0.76
CCDC85AQ96PX6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HAUS4P1-201ENST00000406739 1145 ntBASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 ACA64.2-201ENST00000459014 129 ntBASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 RN7SL399P-201ENST00000471648 279 ntBASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AL033527.5-201ENST00000641382 801 ntBASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC85AQ96PX6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms