Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX27Q96L92 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 ACA64.2-201ENST00000459014 129 ntBASIC17.23■□□□□ 0.35
SNX27Q96L92 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.23■□□□□ 0.35
SNX27Q96L92 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 CASP16P-204ENST00000635032 809 ntBASIC17.23■□□□□ 0.35
SNX27Q96L92 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNX27Q96L92 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.23■□□□□ 0.35
SNX27Q96L92 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.23■□□□□ 0.35
SNX27Q96L92 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX27Q96L92 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SNX27Q96L92 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX27Q96L92 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX27Q96L92 AL353779.1-201ENST00000434793 351 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 RPL13P2-201ENST00000440687 659 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.22■□□□□ 0.35
SNX27Q96L92 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 TPRX2P-201ENST00000535362 881 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 AC023310.3-201ENST00000557027 670 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 AC100756.1-201ENST00000562736 682 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 AC138749.3-201ENST00000567691 622 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNX27Q96L92 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.22■□□□□ 0.35
SNX27Q96L92 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.22■□□□□ 0.35
SNX27Q96L92 AC116165.1-201ENST00000611806 668 ntBASIC17.22■□□□□ 0.35
SNX27Q96L92 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SNX27Q96L92 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.22■□□□□ 0.35
SNX27Q96L92 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNX27Q96L92 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SNX27Q96L92 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.35
SNX27Q96L92 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 AC069224.1-201ENST00000566372 1715 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 AC011477.6-201ENST00000604980 1927 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNX27Q96L92 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.21■□□□□ 0.35
SNX27Q96L92 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.21■□□□□ 0.35
SNX27Q96L92 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms