Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 PRAL-201ENST00000624952 3286 ntBASIC14.08□□□□□ -0.16
TMEM54Q969K7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 AC136604.1-201ENST00000418535 575 ntBASIC14.08□□□□□ -0.16
TMEM54Q969K7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM54Q969K7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 AL080243.2-201ENST00000418783 582 ntBASIC14.07□□□□□ -0.16
TMEM54Q969K7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 HLA-V-204ENST00000476601 1289 ntBASIC14.07□□□□□ -0.16
TMEM54Q969K7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 AC051619.7-201ENST00000568314 623 ntBASIC14.07□□□□□ -0.16
TMEM54Q969K7 AC093028.1-201ENST00000622998 982 ntBASIC14.07□□□□□ -0.16
TMEM54Q969K7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 KRT18P28-201ENST00000453838 1332 ntBASIC14.07□□□□□ -0.16
TMEM54Q969K7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM54Q969K7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM54Q969K7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TMEM54Q969K7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM54Q969K7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms