Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC22.29■■□□□ 1.16
TMC1Q8TDI8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 MIR6069-201ENST00000620069 79 ntBASIC22.28■■□□□ 1.16
TMC1Q8TDI8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TMC1Q8TDI8 AC063926.2-201ENST00000623766 1308 ntBASIC22.28■■□□□ 1.16
TMC1Q8TDI8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 RN7SL692P-201ENST00000464677 288 ntBASIC22.27■■□□□ 1.16
TMC1Q8TDI8 DOC2GP-202ENST00000514950 1163 ntBASIC22.27■■□□□ 1.16
TMC1Q8TDI8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 API5-211ENST00000534695 560 ntTSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TMC1Q8TDI8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
TMC1Q8TDI8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
TMC1Q8TDI8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
TMC1Q8TDI8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
TMC1Q8TDI8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 AL596325.1-201ENST00000563991 1082 ntBASIC22.26■■□□□ 1.15
TMC1Q8TDI8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 AC004461.2-201ENST00000629517 803 ntBASIC22.26■■□□□ 1.15
TMC1Q8TDI8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TMC1Q8TDI8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TMC1Q8TDI8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMC1Q8TDI8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMC1Q8TDI8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TMC1Q8TDI8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms