Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR1227-201ENST00000408484 88 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 LTB4R2-202ENST00000528054 3092 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 TPM3P8-201ENST00000330554 643 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 CAP2P1-201ENST00000557743 1390 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 DPM3-202ENST00000368399 517 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AL353770.1-201ENST00000614915 403 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AP001002.3-201ENST00000623482 206 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 PHKG1P2-201ENST00000457537 863 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ZACNP1-201ENST00000612259 710 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 RN7SL818P-201ENST00000485099 259 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 RN7SL725P-201ENST00000606439 259 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 AC060834.1-201ENST00000443027 2032 ntBASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
ALMS1Q8TCU4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 POU5F1P6-201ENST00000466990 990 ntBASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
ALMS1Q8TCU4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC141586.1-203ENST00000567242 366 ntBASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC007718.1-201ENST00000621078 280 ntBASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms