Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC006449.5-201ENST00000610658 2098 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC241585.1-201ENST00000433527 519 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AL512638.1-201ENST00000457493 794 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AL133215.2-201ENST00000609242 977 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AL662844.4-201ENST00000606367 2838 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 AC100757.3-201ENST00000622361 1406 ntBASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FNDC9Q8TBE3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 AC092364.2-202ENST00000597012 1073 ntBASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FNDC9Q8TBE3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
FNDC9Q8TBE3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms